plyxp
This is the development version of plyxp; for the stable release version, see plyxp.
Data masks for SummarizedExperiment enabling dplyr-like manipulation
Bioconductor version: Development (3.21)
The package provides `rlang` data masks for the SummarizedExperiment class. The enables the evaluation of unquoted expression in different contexts of the SummarizedExperiment object with optional access to other contexts. The goal for `plyxp` is for evaluation to feel like a data.frame object without ever needing to unwind to a rectangular data.frame.
Author: Justin Landis [aut, cre] (ORCID:
Maintainer: Justin Landis <jtlandis314 at gmail.com>
citation("plyxp")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("plyxp")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("plyxp")| plyxp Usage Guide | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | Annotation, GenomeAnnotation, Software, Transcriptomics |
| Version | 1.1.0 |
| In Bioconductor since | BioC 3.20 (R-4.4) (< 6 months) |
| License | MIT + file LICENSE |
| Depends | R (>= 4.4.0) |
| Imports | dplyr, purrr, rlang, SummarizedExperiment, tidyr, tidyselect, vctrs, tibble, pillar, cli, glue, S7, S4Vectors, utils, methods |
| System Requirements | |
| URL | https://github.com/jtlandis/plyxp https://jtlandis.github.io/plyxp |
| Bug Reports | https://www.github.com/jtlandis/plyxp/issues |
See More
| Suggests | devtools, knitr, rmarkdown, testthat, airway, IRanges, here |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | plyxp_1.1.0.tar.gz |
| Windows Binary (x86_64) | plyxp_1.1.0.zip |
| macOS Binary (x86_64) | plyxp_1.1.0.tgz |
| macOS Binary (arm64) | plyxp_1.1.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/plyxp |
| Source Repository (Developer Access) | git clone [email protected]:packages/plyxp |
| Bioc Package Browser | https://code.bioconductor.org/browse/plyxp/ |
| Package Short Url | https://bioconductor.org/packages/plyxp/ |
| Package Downloads Report | Download Stats |