cleaver
This is the development version of cleaver; for the stable release version, see cleaver.
Cleavage of Polypeptide Sequences
Bioconductor version: Development (3.21)
In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html
Author: Sebastian Gibb [aut, cre] (ORCID:
Maintainer: Sebastian Gibb <mail at sebastiangibb.de>
citation("cleaver")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("cleaver")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cleaver")| In-silico cleavage of polypeptides | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Proteomics, Software |
| Version | 1.45.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (11 years) |
| License | GPL (>= 3) |
| Depends | R (>= 3.0.0), methods, Biostrings(>= 1.29.8) |
| Imports | S4Vectors, IRanges |
| System Requirements | |
| URL | https://github.com/sgibb/cleaver/ |
| Bug Reports | https://github.com/sgibb/cleaver/issues/ |
See More
| Suggests | testthat (>= 0.8), knitr, BiocStyle(>= 0.0.14), rmarkdown, BRAIN, UniProt.ws(>= 2.36.5) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | ProteoDisco, synapter |
| Suggests Me | RforProteomics |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | cleaver_1.45.0.tar.gz |
| Windows Binary (x86_64) | cleaver_1.45.0.zip (64-bit only) |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/cleaver |
| Source Repository (Developer Access) | git clone [email protected]:packages/cleaver |
| Bioc Package Browser | https://code.bioconductor.org/browse/cleaver/ |
| Package Short Url | https://bioconductor.org/packages/cleaver/ |
| Package Downloads Report | Download Stats |