geneLenDataBase
This is the development version of geneLenDataBase; for the stable release version, see geneLenDataBase.
Lengths of mRNA transcripts for a number of genomes
Bioconductor version: Development (3.21)
Length of mRNA transcripts for a number of genomes and gene ID formats, largely based on UCSC table browser. Data objects are provided as individual pieces of information to be retrieved and loaded. A variety of different gene identifiers and genomes is supported to ensure wide applicability.
Author: Matthew Young [aut], Nadia Davidson [aut], Federico Marini [ctb, cre] (ORCID:
Maintainer: Federico Marini <marinif at uni-mainz.de>
citation("geneLenDataBase")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("geneLenDataBase")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual | |
| NEWS | Text |
Details
| biocViews | ExperimentData, Genome |
| Version | 1.43.0 |
| License | LGPL (>= 2) |
| Depends | R (>= 2.11.0) |
| Imports | utils, rtracklayer, GenomicFeatures, txdbmaker |
| System Requirements | |
| URL | https://github.com/federicomarini/geneLenDataBase |
| Bug Reports | https://github.com/federicomarini/geneLenDataBase/issues |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | goseq |
| Imports Me | SMITE |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | geneLenDataBase_1.43.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/geneLenDataBase |
| Source Repository (Developer Access) | git clone [email protected]:packages/geneLenDataBase |
| Package Short Url | https://bioconductor.org/packages/geneLenDataBase/ |
| Package Downloads Report | Download Stats |