WES.1KG.WUGSC

This is the development version of WES.1KG.WUGSC; for the stable release version, see WES.1KG.WUGSC.

Whole Exome Sequencing (WES) of chromosome 22 401st to 500th exon from the 1000 Genomes (1KG) Project by the Washington University Genome Sequencing Center (WUGSC).

Bioconductor version: Development (3.21)

The assembled .bam files of whole exome sequencing data from the 1000 Genomes Project. 46 samples sequenced by the Washington University Genome Sequencing Center are included.

Author: Yuchao Jiang, Nancy R. Zhang

Maintainer: Yuchao Jiang <yuchaoj at wharton.upenn.edu>

Citation (from within R, enter citation("WES.1KG.WUGSC")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("WES.1KG.WUGSC")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("WES.1KG.WUGSC")

Using CODEX	PDF
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	DNASeqData, ExperimentData, Homo_sapiens_Data, Project1000genomes, SequencingData
Version	1.39.0
License	GPL-2
Depends
Imports
System Requirements
URL

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Suggests Me	CODEX, iCNV
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Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	WES.1KG.WUGSC_1.39.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/WES.1KG.WUGSC
Source Repository (Developer Access)	git clone [email protected]:packages/WES.1KG.WUGSC
Package Short Url	https://bioconductor.org/packages/WES.1KG.WUGSC/
Package Downloads Report	Download Stats