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SingleMoleculeFootprintingData

This is the development version of SingleMoleculeFootprintingData; for the stable release version, see SingleMoleculeFootprintingData.

Data supporting the SingleMoleculeFootprinting pkg


Bioconductor version: Development (3.21)

This Data package contains data objcets relevanat for the SingleMoleculeFootprinting package. More specifically, it contains one example of aligned sequencing data (.bam & .bai) necessary to run the SingleMoleculeFootprinting vignette. Additionally, we provide data that are essential for some functions to work correctly such as BaitCapture() and SampleCorrelation().

Author: Guido Barzaghi [aut, cre] (ORCID: ), Arnaud Krebs [aut] (ORCID: ), Mike Smith [ctb] (ORCID: )

Maintainer: Guido Barzaghi <guido.barzaghi at embl.de>

Citation (from within R, enter citation("SingleMoleculeFootprintingData")):

Installation

To install this package, start R (version "4.5") and enter: 


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("SingleMoleculeFootprintingData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SingleMoleculeFootprintingData")
SingleMoleculeFootprintingData HTML R Script
Reference Manual PDF
LICENSE Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews ExperimentData, ExperimentHub, SequencingData
Version 1.15.0
License GPL-3
Depends
Imports ExperimentHub, utils
System Requirements
URL
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Suggests knitr, rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me SingleMoleculeFootprinting
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package SingleMoleculeFootprintingData_1.15.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/SingleMoleculeFootprintingData
Source Repository (Developer Access) git clone [email protected]:packages/SingleMoleculeFootprintingData
Package Short Url https://bioconductor.org/packages/SingleMoleculeFootprintingData/
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