EpiMix.data
This is the development version of EpiMix.data; for the stable release version, see EpiMix.data.
Data for the EpiMix package
Bioconductor version: Development (3.21)
Supporting data for the EpiMix R package. It include: - HM450_lncRNA_probes.rda - HM450_miRNA_probes.rda - EPIC_lncRNA_probes.rda - EPIC_miRNA_probes.rda - EpigenomeMap.rda - LUAD.sample.annotation - TCGA_BatchData - MET.data - mRNA.data - microRNA.data - lncRNA.data - Sample_EpiMixResults_lncRNA - Sample_EpiMixResults_miRNA - Sample_EpiMixResults_Regular - Sample_EpiMixResults_Enhancer - lncRNA expression data of tumors from TCGA that are stored in the ExperimentHub.
Author: Yuanning Zheng [aut, cre]
Maintainer: Yuanning Zheng <eric2021 at stanford.edu>
citation("EpiMix.data")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("EpiMix.data")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("EpiMix.data")| vignette | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, ExperimentHub, ExpressionData, Genome, RNASeqData |
| Version | 1.9.0 |
| License | GPL-3 |
| Depends | R (>= 4.2.0), ExperimentHub(>= 0.99.6) |
| Imports | |
| System Requirements | |
| URL | |
| Bug Reports | https://github.com/gevaertlab/EpiMix/issues |
See More
| Suggests | rmarkdown, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | EpiMix |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | EpiMix.data_1.9.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/EpiMix.data |
| Source Repository (Developer Access) | git clone [email protected]:packages/EpiMix.data |
| Package Short Url | https://bioconductor.org/packages/EpiMix.data/ |
| Package Downloads Report | Download Stats |