BeadArrayUseCases

This is the development version of BeadArrayUseCases; for the stable release version, see BeadArrayUseCases.

Analysing Illumina BeadArray expression data using Bioconductor

Bioconductor version: Development (3.21)

Example data files and use cases for processing Illumina BeadArray expression data using Bioconductor

Author: Mark Dunning, Wei Shi, Andy Lynch, Mike Smith, Matt Ritchie

Maintainer: Mike Smith <grimbough at gmail.com>

Citation (from within R, enter citation("BeadArrayUseCases")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("BeadArrayUseCases")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BeadArrayUseCases")

BeadArrayUseCases.pdf	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	ExperimentData, MicroarrayData
Version	1.45.1
License	GPL-2
Depends
Imports	beadarray(>= 2.3.18), limma, GEOquery
System Requirements
URL

Suggests	Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	BeadArrayUseCases_1.45.1.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/BeadArrayUseCases
Source Repository (Developer Access)	git clone [email protected]:packages/BeadArrayUseCases
Package Short Url	https://bioconductor.org/packages/BeadArrayUseCases/
Package Downloads Report	Download Stats